儿茶素-胞嘧啶分子间相互作用的密度泛函研究

采用密度泛函理论的B3LYP方法,在6-31+G*基组水平上研究了儿茶素-胞嘧啶分子间相互作用机制,得到稳定的儿茶素-胞嘧啶复合物11个.计算结果表明氢键对于复合物的稳定性起着重要的作用,并且当复合物形成2个或更多的氢键时,氢键的类型及强度共同决定着复合物的稳定性.我们还应用了分子中的原子(AIM)理论和自然键轨道(NBO)理论对这11种复合物中氢键的性质和特征进行了分析.通过研究发现,所有的氢键复合物进行基组重叠误差(BSSE)校正后的相互作用能为-17.35～-43.27kJ/mol,相互作用能主要由氢键所贡献.振动分析显示,氢键的形成使相对应键的对称伸缩振动频率减小,说明这些复合物中形成的氢键都是正常的红移型氢键,与实验结果相一致.     

Tertiary amines as vinyl source for the formations of aryl or pyrrole ring on amido-substitued 1,4-quinone with the assistance of palladium salt

The one-pot synthesis of 3-isopropyl-6-methyl-1H-benzo[f]indole-4,9-dione ( 3e ), N-(4-[isopentylamino]-3,6-dioxocyclohexa-1,4-dien-1-yl)acetamide ( 4d ), 2-(isopentylamino)-6-methylnaphthalene-1,4-dione ( 5b ), and 2-(4-acetamido-3,6-dioxocyclohexa-1,4-dien-1-yl)-N,N-diisopentyl-3-methylbutanamide ( 6a ) has been achieved via either pyrrol/aryl ring formations or amination reactions from the Pd(II)-catalyzed reaction of N-(3,6-dioxocyclohexa-1,4-dien-1-yl)acetamide ( 2a_BQ ) and in the presence of triisopentylamine. More 3 -, 4 -, 5 -, and 6 -like derivatives were obtained while other trialkylamines were used. Crystal structures of 3d_O , 3e , 4b , 4c , 4d , 5b, and 6a were determined by single-crystal X-ray diffraction methods. The 3 - and 5 -like products reveal the formations of newly generated benzene rings with/without substitutions. The formation of 6a also implies an unusual reaction pathway of its generation. Based on the structural conformations of various 3 -like products, as well as 6a , mechanisms were proposed to account for the formations of these compounds. Various fascinating conformations of products observed in this work demonstrate the diversities of this type of reactions.     

Reactions of Ruthenium–Allenylidene Complexes Tethering a Cyclopropyl Group

Two cyclopropyl allenylidene complexes [Ru]=CCC(R)(C₃H₅) ([Ru]=[RuCp(PPh₃)₂], Cp=Cyclopentadienyl; R=thiophene ( 2a ) and R=Ph ( 2b )) are prepared from the reactions of [Ru]Cl with the corresponding 1‐cyclopropyl‐2‐propyn‐1‐ol in the presence of KPF₆. Thermal treatment, halide‐anion addition, and palladium‐catalyzed reactions of 2a and 2b all lead to a ring expansion of the cyclopropyl group, giving the vinylidene complexes 4a and 4b , respectively, each with a five‐membered ring. This ring expansion proceeds by C C bond formation between Cβ of the cumulative double bond and a methylene group of the cyclopropyl ring. In the reaction of 2a with pyrrole, consecutive formation of two C C bonds, one between C‐2 of pyrrole and Cγ of 2a and the other between C‐3 of pyrrole and Cα, results in the formation of 6a . The reaction proceeds by addition of pyrrole and 1,3‐proton shifts. The hydrogenation of 2a by NaBH₄ is carried out in different solvents. The cumulative double bonds are reduced regioselectively to give a mixture of 7a and 8a . Interestingly, use of different solvents leads to different ratios of 7a and 8a . Presence of a protic solvent like methanol in dichloromethane or chloroform solution increases the yield of 8a , thus revealing that both the rates of hydroboration and deboronation increase. The structures of two new complexes 4a and 6a have been firmly established by X‐ray diffraction analysis.     

A time-dependent density functional study on optical response in all-inorganic lead-halide perovskite nanostructures

Recently, all-inorganic perovskite nanostructures have become a hot research topic due to their unique optical response and novel properties. Here, we theoretically study the optical response in Cs₂PbX₄ and CsPb₂X₅ (X = Cl, Br, and I) nanostructures. First, to study the ground state, we calculate the band structures of the periodic system using the HSE06 method, which shows that all those periodic perovskites possess the direct band gaps, with distribution from 2.225 to 3.536 eV. Their valence band maximum are mainly contributed from both halogen and lead atoms, while the conduction band minimum are mainly contributed from lead atoms. Then, we study the excited state using the time-dependent density functional theory method and find that, with the increase of halogen atom radius, the photogenerated carrier concentrations in perovskite nanostructures become larger, while the surface plasmon resonance becomes localized rather than long-range. Moreover, through the analysis of photocurrent and local field enhancement, Cs₂PbX₄ and CsPb₂X₅ nanostructures exhibit nearly 40 μA photocurrent along the direction of optical polarization. Besides, by regulating the different anions, we predict that field enhancement in Cs₂PbI₄ and CsPb₂I₅ share a much stronger distribution at both the center and border parts of Pb-I planes due to localized plasmon resonance, while other perovskites are distributed at the edge parts of Pb-I planes, caused by long-range plasmon resonance. Our research shows that all-inorganic perovskite nanostructures are great candidate materials for developing optoelectronic devices working in high-frequency and high-energy regions and improving their application in sensitive detection and sensors.     

Intriguing generative metabolism discovery of reactive metabolite nitroso of lapatinib and relevant structural modification

Lapatinib is required as a therapy for advanced or metastatic breast cancer. However, its reactive metabolite (RM) nitroso was implicated in idiosyncratic hepatotoxicity. Density functional theory was performed to explore the metabolism of nitroso formation. Primary hydroxylation amine is a critical intermediate to produce nitroso. Three pathways from secondary alkylamine lapatinib to primary hydroxylation amine were designed and discussed. Calculation results show that it is difficult to form primary hydroxylation amine through common proposed hydrolysis nitrone with a barrier of 36.67 kcal/mol (path A), but it is smoothly formed by paths B and C with moderate determined barriers of 15.09 kcal/mol and 16.56 kcal/mol, respectively. Subsequently, we demonstrate that the mechanism of nitroso formation from primary hydroxylation amine should be a double hydrogen atom transfer rather than the previously proposed hydrolysis primary dihydroxylation amine. The barrier of the former is obviously lower than the latter. Based on metabolism results and structure analysis, several lapatinib derivatives are designed. Molecular docking of designed compounds with epidermal growth factor receptor (EGFR) shows that they share a similar binding mode with lapatinib. In particular, 2a to 2d show similar binding energy to lapatinib. This work showed metabolism details of nitroso formation from lapatinib and its structure modification, which can enrich the metabolism of amine drugs and provide guidance for drug optimization and design.     

Magnesium perchlorate anhydrate,Mg(ClO4)2, from laboratory X‐ray powder data

The previously unknown crystal structure of magnesium perchlorate anhydrate, determined and refined from laboratory X‐ray powder diffraction data, represents a new structure type. The title compound was obtained by heating magnesium perchlorate hexahydrate at 523 K for 2 h under vacuum and it crystallizes in the monoclinic space group P2₁/c. The asymmetric unit contains one Mg (site symmetry on special position 2a), one Cl and four O sites (on general positions 4e). The structure consists of a three‐dimensional network resulting from the corner‐sharing of MgO₆ octahedra and ClO₄ tetrahedra. Each MgO₆ octahedron share corners with six ClO₄ tetrahedra. Each ClO₄ tetrahedron shares corners with three MgO₆ octahedra, with one O‐atom corner dangling. The ClO₄ tetrahedra are oriented in such a way that one‐dimensional channels parallel to [100] are formed between the dangling O atoms.     

An Aptamer-Nanotrain Assembled from Six-Letter DNA Delivers Doxorubicin Selectively to Liver Cancer Cells

Expanding the number of nucleotides in DNA increases the information density of functional DNA molecules, creating nanoassemblies that cannot be invaded by natural DNA/RNA in complex biological systems. Here, we show how six-letter GACTZP DNA contributes this property in two parts of a nanoassembly: 1) in an aptamer evolved from a six-letter DNA library to selectively bind liver cancer cells; and 2) in a six-letter self-assembling GACTZP nanotrain that carries the drug doxorubicin. The aptamer-nanotrain assembly, charged with doxorubicin, selectively kills liver cancer cells in culture, as the selectivity of the aptamer binding directs doxorubicin into the aptamer-targeted cells. The assembly does not kill untransformed cells that the aptamer does not bind. This architecture, built with an expanded genetic alphabet, is reminiscent of antibodies conjugated to drugs, which presumably act by this mechanism as well, but with the antibody replaced by an aptamer.     

Lattice Distortion in Hollow Multi-Shelled Structures for Efficient Visible-Light CO2 Reduction with a SnS2/SnO2 Junction

Precise control of the micro-/nanostructures of nanomaterials, such as hollow multi-shelled structures (HoMSs), has shown its great advantages in various applications. Now, the crystal structure of building blocks of HoMSs are controlled by introducing the lattice distortion in HoMSs, for the first time. The lattice distortion located at the nanoscale interface of SnS₂/SnO₂ can provide additional active sites, which not only provide the catalytic activity under visible light but also improve the separation of photoexcited electron–hole pairs. Combined with the efficient light utilization, the natural advantage of HoMSs, a record catalytic activity was achieved in solid–gas system for CO₂ reduction, with an excellent stability and 100 % CO selectivity without using any sensitizers or noble metals.     

Visible-Light-Induced ortho-Selective Migration on Pyridyl Ring: Trifluoromethylative Pyridylation of Unactivated Alkenes

The photocatalyzed ortho-selective migration on a pyridyl ring has been achieved for the site-selective trifluoromethylative pyridylation of unactivated alkenes. The overall process is initiated by the selective addition of a CF₃ radical to the alkene to provide a nucleophilic alkyl radical intermediate, which enables an intramolecular endo addition exclusively to the ortho-position of the pyridinium salt. Both secondary and tertiary alkyl radicals are well-suited for addition to the C2-position of pyridinium salts to ultimately provide synthetically valuable C2-fluoroalkyl functionalized pyridines. Moreover, the method was successfully applied to the reaction with P-centered radicals. The utility of this transformation was further demonstrated by the late-stage functionalization of complex bioactive molecules.